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Status
Public on Mar 26, 2002
Title
PC3 AS2
Sample type
SAGE
Anchor
NlaIII
Tag Count
40768
Tag Length
10
Source name
PC3
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Identification of targets of JNK2 signaling involved in regulation of human tumor cell growth. PC3 cells, AS2 treatment, total number of 42,236 SAGE tags sequenced. 40,768 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less).
Submission date
Mar 26, 2002
Last update date
Nov 19, 2008
Contact name
Nikki J. Holbrook
E-mail(s)
nikki.holbrook@yale.edu
Phone
203-737-5847
Fax
203-737-1801
Organization name
Yale University School of Medicine
Department
Department of Internal Medicine
Lab
Geriatrics Section
Street address
333 Cedar Street
City
New Heaven
State/province
CT
ZIP/Postal code
06520
Country
USA
Platform ID
GPL4
Series (1)
GSE508
Targets of c-Jun NH(2)-terminal kinase 2-mediated tumor growth regulation
Data table header descriptions
TAG
PC3 AS2
COUNT
Cleaned-Up
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAC
1
24.53
AAAAAAAAGA
1
24.53
AAAAAAAATA
1
24.53
AAAAAAAATC
1
24.53
AAAAAAACAG
1
24.53
AAAAAAACAT
1
24.53
AAAAAAACTA
1
24.53
AAAAAAAGCA
2
49.06
AAAAAAAGCT
1
24.53
AAAAAAATCT
1
24.53
AAAAAAATGA
1
24.53
AAAAAAATGC
1
24.53
AAAAAACCCA
2
49.06
AAAAAACCCC
1
24.53
AAAAAACCCT
1
24.53
AAAAAACCTC
1
24.53
AAAAAACGCC
1
24.53
AAAAAACTCC
1
24.53
AAAAAACTGA
1
24.53
AAAAAAGACA
1
24.53
Total number of rows: 20661 Table truncated, full table size 384 Kbytes .Supplementary data files not provided