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GEO accession:
Sample GSM161249
Query DataSets for GSM161249
Status
Public on Feb 08, 2008
Title
Head_single_housing_6day_male_3_1
Sample type
RNA
Source name
Head_single_housing_6day_male_3_1
Organism
Drosophila melanogaster
Characteristics
head from 6-day-old single-housed male Canton-S
Treatment protocol
new eclosion males were housed individually in vials for 6 days
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Standard Affymetrix
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
20 single-housed males were frozen in liquid nitrogen between 5pm-6pm. Heads were separated and used for RNA extraction.
Data processing
Rosetta Resolver Platform
Submission date
Feb 08, 2007
Last update date
Aug 28, 2018
Contact name
Liming Wang
E-mail(s)
lmwang@caltech.edu
Phone
626-395-6822
Organization name
California Institute of Technology
Department
216-76， Division of Biology
Lab
David J Anderson
Street address
1200 E. California Bl.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1322
Series (1)
GSE6994
Comparative gene expression profiling of group-housed, less aggressive vs. single-housed, more aggressive male flies
Relations
Reanalyzed by
GSE119084
Data table header descriptions
ID_REF
VALUE
a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION-P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION-P-VALUE
AFFX-BioB-5_at
179.377
P
9.4506e-05
AFFX-BioB-M_at
239.012
P
9.4506e-05
AFFX-BioB-3_at
151.723
P
0.000126798
AFFX-BioC-5_at
379.515
P
6.02111e-05
AFFX-BioC-3_at
408.377
P
4.42873e-05
AFFX-BioDn-5_at
1041.12
P
4.42873e-05
AFFX-BioDn-3_at
1957.78
P
5.16732e-05
AFFX-CreX-5_at
5827.78
P
5.16732e-05
AFFX-CreX-3_at
7402.29
P
4.42873e-05
AFFX-DapX-5_at
95.6114
P
0.000146581
AFFX-DapX-M_at
131.747
P
0.000856509
AFFX-DapX-3_at
286.962
P
5.16732e-05
AFFX-LysX-5_at
16.0602
P
0.000258358
AFFX-LysX-M_at
35.2093
A
0.239063
AFFX-LysX-3_at
70.6741
P
4.42873e-05
AFFX-PheX-5_at
25.2058
P
0.00159257
AFFX-PheX-M_at
30.7398
P
0.0284573
AFFX-PheX-3_at
47.5368
P
0.00933744
AFFX-ThrX-5_at
31.6304
P
0.0012475
AFFX-ThrX-M_at
33.1355
P
0.00179591
Total number of rows:
18952
Table truncated, full table size
582 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM161249.CEL.gz
2.0 Mb
(ftp)
(http)
CEL
GSM161249.CHP.gz
106.7 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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