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Sample GSM1657542 Query DataSets for GSM1657542
Status Public on Sep 25, 2019
Title Control_fetal_lung_rep8 [mRNA]
Sample type RNA
 
Source name Fetal lung, E18.5, from control mother
Organism Mus musculus
Characteristics strain/background: Balb/c
genotype/variation: WT
tissue: fetal lung
age: E18.5
gender: female
treatment: untreated mother
Treatment protocol Mice were treated as described in the paper. Briefly, eight-week-old virgin females were mated with each one proven male breeder for 24h. To allow proper implantation of the fertilized oocyte, mice were exposed from gestational day (GD) 2.5 to smoke or filtered air until GD 17.5.
Growth protocol Animals housed under spf conditions.
Extracted molecule total RNA
Extraction protocol miRNeasy (Qiagen).
Label Biotin
Label protocol Ovation PicoSL WTA System V2 and Encore Biotin Module (Nugen).
 
Hybridization protocol According to the Affymetrix expression protocol (HWS kit).
Scan protocol According to the Affymetrix expression protocol with GeneChip Scanner 3000 7G.
Description Ctrl_F381
Gene expression data from fetal lung, E18.5, from control mother.
Data processing RMA probeset summary with standard settings of the Affymetrix Expression Console software (v.1.3.0.187) including median polish and Sketch-Quantile normalisation.
 
Submission date Apr 14, 2015
Last update date Sep 26, 2019
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL17400
Series (2)
GSE67883 Deregulated pulmonary growth hormones after intrauterine smoke exposure
GSE67888 Deregulated pulmonary growth hormones after intrauterine smoke exposure

Data table header descriptions
ID_REF
VALUE RMA signal intensity (log2)

Data table
ID_REF VALUE
17550607 8.918
17550609 2.593
17550611 8.096
17550613 1.975
17550615 8.964
17550617 1.534
17550619 8.662
17550621 1.345
17550623 9.621
17550625 1.870
17550627 11.515
17550629 3.267
17550631 10.306
17550633 2.282
17550681 12.070
17550683 2.772
17550685 11.614
17550687 1.342
17551135 8.223
17551137 1.908

Total number of rows: 41345

Table truncated, full table size 605 Kbytes.




Supplementary file Size Download File type/resource
GSM1657542_Ctrl_F381.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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