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Sample GSM1722738 Query DataSets for GSM1722738
Status Public on Jun 01, 2018
Title pDC-8 hrs post CpGB-rep 1
Sample type RNA
 
Source name pDC-8 hrs post CpGB
Organism Homo sapiens
Characteristics cell type: pDC
hrs post cpgb stimulation: 8
replicate: 1
Treatment protocol pDCs were stimulated with 0.5 µM of CpGB
Growth protocol pDCs were isolated from healthy donors by sorting as lineage-negative (CD3, CD14, CD15, CD16, CD19, CD20, CD25, CD56, and CD11c) cells using a pDC isolation kit (Miltenyi Biotec) to more than 98% purity.
Extracted molecule total RNA
Extraction protocol RNA isolation was performed using Qiagen RNeasy mini kit according to the manufacturer’s instructions
Label biotin
Label protocol not provided
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9373549131_C
Data processing Average Normalization per GenomeStudio
 
Submission date Jun 25, 2015
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (2)
GSE70277 Transcriptional repression of IRF7 by MYC is critical for antiviral immune response in human pDC [pDC]
GSE70278 Transcriptional repression of IRF7 by MYC is critical for antiviral immune response in human pDC

Data table header descriptions
ID_REF
VALUE Normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1806862 2.585821597 0.3090909
ILMN_2385239 28.45813703 0
ILMN_1717025 5.057878368 0.1753247
ILMN_1762337 18.26049934 0.005194805
ILMN_2055271 17.45620187 0.007792208
ILMN_1736007 0.43180774 0.4506494
ILMN_2383229 -4.795230458 0.7987013
ILMN_1806310 -2.451499587 0.6623377
ILMN_1779670 2.134578433 0.3363636
ILMN_1653355 -0.260169635 0.5012987
ILMN_1717783 4.892524558 0.1805195
ILMN_1705025 9.838546169 0.04545455
ILMN_1814316 1.811757601 0.3558442
ILMN_2359168 1.166323659 0.4
ILMN_1731507 0.331208429 0.4558442
ILMN_1787689 4.889895629 0.1805195
ILMN_3241953 14.83635595 0.01168831
ILMN_1745607 7.235664196 0.09220779
ILMN_2136495 -0.402873076 0.5142857
ILMN_1668111 -10.42421884 0.9779221

Total number of rows: 47323

Table truncated, full table size 1552 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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