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Sample GSM1722739 Query DataSets for GSM1722739
Status Public on Jun 01, 2018
Title pDC-12 hrs post CpGB-rep 1
Sample type RNA
 
Source name pDC-12 hrs post CpGB
Organism Homo sapiens
Characteristics cell type: pDC
hrs post cpgb stimulation: 12
replicate: 1
Treatment protocol pDCs were stimulated with 0.5 µM of CpGB
Growth protocol pDCs were isolated from healthy donors by sorting as lineage-negative (CD3, CD14, CD15, CD16, CD19, CD20, CD25, CD56, and CD11c) cells using a pDC isolation kit (Miltenyi Biotec) to more than 98% purity.
Extracted molecule total RNA
Extraction protocol RNA isolation was performed using Qiagen RNeasy mini kit according to the manufacturer’s instructions
Label biotin
Label protocol not provided
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description 9373549131_D
Data processing Average Normalization per GenomeStudio
 
Submission date Jun 25, 2015
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) Nicole.Baldwin@BSWHealth.org
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (2)
GSE70277 Transcriptional repression of IRF7 by MYC is critical for antiviral immune response in human pDC [pDC]
GSE70278 Transcriptional repression of IRF7 by MYC is critical for antiviral immune response in human pDC

Data table header descriptions
ID_REF
VALUE Normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1806862 4.172125638 0.1233766
ILMN_2385239 21.67644088 0.001298701
ILMN_1717025 4.97927353 0.1012987
ILMN_1762337 16.26925838 0.003896104
ILMN_2055271 10.01104863 0.02077922
ILMN_1736007 -0.404870258 0.5103896
ILMN_2383229 -3.462721598 0.8012987
ILMN_1806310 0.64503864 0.4012987
ILMN_1779670 0.578496139 0.4116883
ILMN_1653355 5.253216295 0.0961039
ILMN_1717783 0.124103754 0.451948
ILMN_1705025 3.858558391 0.138961
ILMN_1814316 2.514014378 0.2285714
ILMN_2359168 2.38703153 0.2428571
ILMN_1731507 -5.582745095 0.9363636
ILMN_1787689 4.193090828 0.1233766
ILMN_3241953 6.851979848 0.06753246
ILMN_1745607 8.095986013 0.04285714
ILMN_2136495 -2.475189763 0.7181818
ILMN_1668111 0.299353986 0.4363636

Total number of rows: 47323

Table truncated, full table size 1547 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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