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Sample GSM18425 Query DataSets for GSM18425
Status Public on Mar 24, 2004
Title PGA_PA-D_216
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 827 P 0.000754
AFFX-BioB-M_at 1641.6 P 0.00039
AFFX-BioB-3_at 650.5 P 0.005565
AFFX-BioC-5_at 2178.8 P 0.00007
AFFX-BioC-3_at 1937.7 P 0.000044
AFFX-BioDn-5_at 2617 P 0.00006
AFFX-BioDn-3_at 13635.9 P 0.000127
AFFX-CreX-5_at 25932 P 0.000052
AFFX-CreX-3_at 28836.5 P 0.000044
AFFX-DapX-5_at 65.6 A 0.108979
AFFX-DapX-M_at 90.2 A 0.327079
AFFX-DapX-3_at 7.6 A 0.973889
AFFX-LysX-5_at 65.6 M 0.062929
AFFX-LysX-M_at 30.3 A 0.749204
AFFX-LysX-3_at 39.5 A 0.116113
AFFX-PheX-5_at 8 A 0.883887
AFFX-PheX-M_at 4.7 A 0.969024
AFFX-PheX-3_at 49.8 A 0.712257
AFFX-ThrX-5_at 46.8 A 0.41138
AFFX-ThrX-M_at 23.3 A 0.559354

Total number of rows: 54675

Table truncated, full table size 1452 Kbytes.




Supplementary file Size Download File type/resource
GSM18425_PA-D_216.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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