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Sample GSM18429 Query DataSets for GSM18429
Status Public on Mar 24, 2004
Title PGA_PA-D_319
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 959.7 P 0.001102
AFFX-BioB-M_at 1320.8 P 0.000754
AFFX-BioB-3_at 713 P 0.005565
AFFX-BioC-5_at 2657.3 P 0.00011
AFFX-BioC-3_at 2448.2 P 0.000044
AFFX-BioDn-5_at 3527.8 P 0.00007
AFFX-BioDn-3_at 15929.2 P 0.000127
AFFX-CreX-5_at 31837 P 0.000052
AFFX-CreX-3_at 33699.2 P 0.000044
AFFX-DapX-5_at 56.2 A 0.227636
AFFX-DapX-M_at 69.6 A 0.48511
AFFX-DapX-3_at 11.3 A 0.941556
AFFX-LysX-5_at 66.6 A 0.275146
AFFX-LysX-M_at 69.1 A 0.58862
AFFX-LysX-3_at 30 A 0.216524
AFFX-PheX-5_at 8.7 A 0.834139
AFFX-PheX-M_at 14.2 A 0.910522
AFFX-PheX-3_at 54.7 A 0.724854
AFFX-ThrX-5_at 27.9 A 0.659339
AFFX-ThrX-M_at 18.3 A 0.834139

Total number of rows: 54675

Table truncated, full table size 1453 Kbytes.




Supplementary file Size Download File type/resource
GSM18429_PA-D_319.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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