|
Status |
Public on Jun 25, 2007 |
Title |
IRTGFBd8_13 |
Sample type |
RNA |
|
|
Source name |
MCF10A
|
Organism |
Homo sapiens |
Characteristics |
MCF10A
|
Extracted molecule |
total RNA |
Extraction protocol |
RNeasy for cultured cells.
|
Label |
biotin
|
Label protocol |
Standard Affymetrix High Throughput Array protocol.
|
|
|
Hybridization protocol |
Standard Affymetrix High Throughput Array protocol.
|
Scan protocol |
Standard Affymetrix High Throughput Array protocol.
|
Description |
X-ray irradiation (2 Gy) and TGFB added.
|
Data processing |
CEL files were processed in a single batch with RMA 2, as implemented in Bioconductor for R version 2.3.0, with default parameters.
|
|
|
Submission date |
Jun 22, 2007 |
Last update date |
Aug 14, 2011 |
Contact name |
Mary Helen Barcellos-Hoff |
E-mail(s) |
mhbarcellos-hoff@lbl.gov
|
Phone |
510.486.6371
|
Fax |
510.486.5586
|
URL |
http://www.lbl.gov/lifesciences/labs/barcellos-hoff_lab.html
|
Organization name |
Lawrence Berkeley National Laboratory
|
Department |
Life Sciences Division
|
Lab |
Barcellos-Hoff
|
Street address |
1 Cyclotron Rd MS977R225A
|
City |
Berkeley |
State/province |
CA |
ZIP/Postal code |
94720 |
Country |
USA |
|
|
Platform ID |
GPL3921 |
Series (1) |
GSE8240 |
EMT initiation in MCF10A cells subjected to ionizing radiation and treatment with transforming growth factor beta-1. |
|