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GEO accession:
Sample GSM23394
Query DataSets for GSM23394
Status
Public on Nov 19, 2004
Title
THP-1
Sample type
SAGE
Anchor
NlaIII
Tag Count
3519
Tag Length
10
Source name
Cultured THP-1 cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Library contructed from proliferating THP-1 cells growing in RPMI1640 supplemented with 10%FCS, penecillin/Steptomycin and B-ME.
Submission date
May 19, 2004
Last update date
May 27, 2005
Contact name
J Max Wilkinson
E-mail(s)
jmaxwilk@rfc.ucl.ac.uk
Phone
+44 (0)207 830 2475
Fax
+44 (0)207 830 2475
Organization name
Royal Free & University College London School of Medicine
Department
Medicine
Lab
Centre For Nephrology
Street address
Rowland Hill Street
City
London
State/province
UK
ZIP/Postal code
NW3 2PF
Country
United Kingdom
Platform ID
GPL4
Series (1)
GSE1439
Differentiation of cultured THP-1 cells
Data table header descriptions
TAG
10bp SAGE TAG
COUNT
Absolute tag count
TPM
TAG Frequency per million
Data table
TAG
COUNT
TPM
TTATCAAGTG
73
20745
TGCCAAGGGT
63
17903
ATAATACATA
38
10799
TTATATAGTG
30
8525
ATGTCTCAAA
28
7957
GCCTCCAAGG
27
7673
AGGCAGACAG
24
6820
GAGCGTTTTG
21
5968
CCAGAACAGA
20
5683
GATTCCGTGA
20
5683
CAAGGTGACA
19
5399
AGAGCGAAGT
18
5115
AAGGAAATGG
17
4831
AACAATTTGG
15
4263
CACAAACGGT
15
4263
ATACTGACAT
14
3978
GTGGCTCACA
14
3978
GTGTTAACCA
14
3978
AAAAAGTACC
13
3694
GATACTTGGA
13
3694
Total number of rows:
2147
Table truncated, full table size
35 Kbytes
.
Supplementary data files not provided
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