NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2829269 Query DataSets for GSM2829269
Status Public on Oct 23, 2020
Title CD3+CD56- biological replicate 1
Sample type RNA
 
Source name CD3+CD56- lymphocyte subset flow sorted by PBMCs
Organism Homo sapiens
Characteristics cell type: T cell
cell subset: CD3+CD56-
Treatment protocol Cells were not treated in any way
Growth protocol Cells were flow sorted and frozen immediately upon isolation
Extracted molecule total RNA
Extraction protocol The RNA was extracted according the RNNeasy Plus Micro Handbook 12/2014 and eluted using 20µl H2O
Label biotin
Label protocol The RNA was labeled using 2 ng and the GeneChip Pico Reagent kit and according to AffymetrixÕs protocol
 
Hybridization protocol Hybridization is an integral part of the GeneChip Pico protocol (Cartridge Array Hybridization on the GeneChip¨ Instrument)
Scan protocol The arrays were scanned on a GeneChip scanner 3000 7G
Description Gene expression data from human lymphocytes
Data processing Data was analyzed using the the Affymetrix Expression Console software. Normalization was done by RMA normalization
 
Submission date Oct 24, 2017
Last update date Oct 23, 2020
Contact name Mario Galgani
E-mail(s) mario.galgani@unina.it
Organization name IEOS Istituto per l'endocrinologia e l'oncologia sperimentale
Street address via S. Pansini, 5
City Naples
ZIP/Postal code 80131
Country Italy
 
Platform ID GPL23159
Series (1)
GSE106082 Transcriptome of T cell subsets

Data table header descriptions
ID_REF
VALUE RMA normalized signal

Data table
ID_REF VALUE
TC0100006437.hg.1 4.872488
TC0100006476.hg.1 5.622662
TC0100006479.hg.1 6.757172
TC0100006480.hg.1 6.443654
TC0100006483.hg.1 8.167027
TC0100006486.hg.1 6.326951
TC0100006490.hg.1 5.076047
TC0100006492.hg.1 6.391932
TC0100006494.hg.1 5.141859
TC0100006497.hg.1 4.61377
TC0100006499.hg.1 6.522664
TC0100006501.hg.1 5.40169
TC0100006502.hg.1 4.491059
TC0100006514.hg.1 4.094022
TC0100006516.hg.1 5.909238
TC0100006517.hg.1 4.606534
TC0100006524.hg.1 6.500241
TC0100006540.hg.1 5.603005
TC0100006548.hg.1 3.535459
TC0100006550.hg.1 6.115458

Total number of rows: 24351

Table truncated, full table size 659 Kbytes.




Supplementary file Size Download File type/resource
GSM2829269_Human_3+56--1.CEL.gz 1.1 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap