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GEO accession:
Sample GSM3020637
Query DataSets for GSM3020637
Status
Public on May 03, 2018
Title
CD8
Sample type
RNA
Source name
CD8 T cells
Organism
Mus musculus
Characteristics
cell type: CD8 T cells
treatment: None
Treatment protocol
CD8 under Tc1 cytokine condition and CD8 under Tc1 cytokine condition with cholesterol treatment.
Growth protocol
T cell culture.
Extracted molecule
total RNA
Extraction protocol
Trizol RNA extraction.
Label
Biotin
Label protocol
WT Sense Target Labeling.
Hybridization protocol
GeneChip Hybridization.
Scan protocol
Affymetrix GeneChip Command Console (AGCC).
Description
Yi-Q17003
Data processing
Affymetrix GeneChip Command Console (AGCC) Software.
The 'GSE111033_array_cd8_cd8_cho.txt' file includes raw signals, ratios, and array annotation.
Submission date
Feb 22, 2018
Last update date
May 04, 2018
Contact name
xingzhe ma
E-mail(s)
mxingzhe@gmail.com
Organization name
houston methodist hospital
Department
cancer center
Lab
qing yi
Street address
6565 fannin street
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platform ID
GPL23038
Series (1)
GSE111033
Gene expression in CD8 vs. CD8+Cho cells
Data table header descriptions
ID_REF
VALUE
Raw RNA signal
Data table
ID_REF
VALUE
TC0100000014.mm.2
311.7716
TC0100000018.mm.2
14.67378
TC0100000021.mm.2
50.29584
TC0100000022.mm.2
5.760719
TC0100000023.mm.2
6.370583
TC0100000027.mm.2
227.1058
TC0100000038.mm.2
446.6484
TC0100000039.mm.2
22.5901
TC0100000041.mm.2
19.8868
TC0100000044.mm.2
204.9682
TC0100000045.mm.2
11.99927
TC0100000048.mm.2
76.86336
TC0100000055.mm.2
21.81247
TC0100000056.mm.2
8.450165
TC0100000064.mm.2
13.28299
TC0100000071.mm.2
5.215251
TC0100000082.mm.2
17.7686
TC0100000092.mm.2
375.0692
TC0100000097.mm.2
30.4397
TC0100000101.mm.2
73.9926
Total number of rows:
28846
Table truncated, full table size
777 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3020637_Yi-Q17003.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
Processed data are available on Series record
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