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GEO accession:
Sample GSM30396
Query DataSets for GSM30396
Status
Public on Sep 11, 2004
Title
A. thal leaf tissue
Sample type
SAGE
Anchor
NlaIII
Tag Count
79754
Tag Length
10
Source name
aerial tissue
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Arabidopsis thaliana (Col-4) aerial tissue collected from 14-day old plants. Grown under sterile conditions at 22 degrees Celsius and 125 uE light on 0.5xMS media.
Submission date
Sep 08, 2004
Last update date
Dec 10, 2010
Contact name
Dustin Cram
E-mail(s)
cramd@agr.gc.ca
Phone
(306)-956-2887
Organization name
Agriculture and Agri-Food Canada - Saskatoon Research Centre
Street address
City
Saskatoon
ZIP/Postal code
S7N 0X2
Country
Canada
Platform ID
GPL25
Series (1)
GSE25993
SAGE analysis of A. thaliana leaf tissue
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAC
7
87.77
AAAAAAAAAG
10
125.39
AAAAAAAAAT
3
37.62
AAAAAAAACA
2
25.08
AAAAAAAAGA
2
25.08
AAAAAAAATA
1
12.54
AAAAAAAGAA
5
62.69
AAAAAAAGGA
1
12.54
AAAAAAAGTT
1
12.54
AAAAAAATAG
1
12.54
AAAAAAATCA
6
75.23
AAAAAAATGA
6
75.23
AAAAAAATGG
1
12.54
AAAAAAATTG
2
25.08
AAAAAACAAA
3
37.62
AAAAAACCGT
1
12.54
AAAAAACCTA
9
112.85
AAAAAAGAAA
2
25.08
AAAAAAGACA
1
12.54
AAAAAAGAGA
2
25.08
Total number of rows:
21425
Table truncated, full table size
400 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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