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GEO accession:
Sample GSM3090963
Query DataSets for GSM3090963
Status
Public on Apr 14, 2020
Title
CD8+Cho 0.5 [Yi-Q17006]
Sample type
RNA
Source name
CD8+Cho 0.5
Organism
Mus musculus
Characteristics
cell type: CD8
protocol: Tc1 cytokine condition with 0.5 microgram per ml cholesterol treatment
Treatment protocol
CD8 under Tc1 cytokine condition and CD8 under Tc1 cytokine condition with 0.5 or 0.75 cholesterol treatment
Growth protocol
T cell culture
Extracted molecule
total RNA
Extraction protocol
Trizol RNA extration
Label
biotin
Label protocol
WT Sense Target Labeling
Hybridization protocol
GeneChip Hybridization
Scan protocol
AGCC
Data processing
Affymetrix GeneChip Command Console (AGCC) Software
Submission date
Apr 10, 2018
Last update date
Apr 14, 2020
Contact name
xingzhe ma
E-mail(s)
mxingzhe@gmail.com
Organization name
houston methodist hospital
Department
cancer center
Lab
qing yi
Street address
6565 fannin street
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platform ID
GPL23038
Series (1)
GSE112901
Gene expression in CD3/CD28 stimulated CD8 vs CD8 with various dosage of Cholesterol treatment
Data table header descriptions
ID_REF
VALUE
RMA signal intensity
Data table
ID_REF
VALUE
TC0100000014.mm.2
311.3445
TC0100000018.mm.2
14.60535
TC0100000021.mm.2
63.40097
TC0100000022.mm.2
6.687696
TC0100000023.mm.2
6.751922
TC0100000027.mm.2
323.8937
TC0100000038.mm.2
453.5639
TC0100000039.mm.2
15.66649
TC0100000041.mm.2
13.81219
TC0100000044.mm.2
231.3026
TC0100000045.mm.2
12.75854
TC0100000048.mm.2
87.83875
TC0100000055.mm.2
11.04338
TC0100000056.mm.2
9.346876
TC0100000064.mm.2
11.1239
TC0100000071.mm.2
7.310213
TC0100000082.mm.2
13.40066
TC0100000092.mm.2
387.744
TC0100000097.mm.2
23.69313
TC0100000101.mm.2
102.4512
Total number of rows:
28846
Table truncated, full table size
777 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM3090963_Yi-Q17006.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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