NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM346688 Query DataSets for GSM346688
Status Public on Dec 02, 2008
Title dedifferentiated mouse cardiac fibroblast(3)
Sample type RNA
 
Source name dedifferentiated mouse cardiac fibroblast
Organism Mus musculus
Characteristics strain: C57BL/6 mouse
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by RNeasy Mini kit(Qiagen)
Label biotin
Label protocol Labeling was performed following the standard Affymetrix protocol
 
Hybridization protocol Hybridization to the Affymetrix GeneChip Gene 1.0 ST Array is performed according to standard Affymetrix protocols.
Scan protocol After hybridization, the chips were stained and washed in a Genechip Fluidics Station 450(Affymetrix) and scanned by using a Genechip Array scanner 3000 7G (Affymetrix).
Description dedifferentiated mouse cardiac fibroblast replicate 3
Data processing The scanned data was processed using Affymetrix Expression Console version1.1 RMA Normalization and the further analysis was performed using Multi-Experiment Viewer(MEV) version 4.0
 
Submission date Dec 01, 2008
Last update date Dec 01, 2008
Contact name Hyun-Jai Cho
E-mail(s) hyunjaicho@snu.ac.kr
Phone 82-2-2072-3931
Fax 82-2-3675-0805
Organization name Seoul National University Hospital
Department Division of Cardiology, Department of Internal Medicine
Street address 28 Yongon-Dong, Jongno-gu
City Seoul
ZIP/Postal code 110-744
Country South Korea
 
Platform ID GPL6246
Series (1)
GSE13770 Induction of pluripotent stem cells from adult somatic cells by protein-based dedifferentiation

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
10338001 11.2245
10338002 6.01716
10338003 9.66178
10338004 8.52151
10338005 2.31386
10338006 2.46399
10338007 2.65188
10338008 3.13667
10338009 8.36533
10338010 2.34754
10338011 5.22104
10338012 2.4057
10338013 2.28464
10338014 2.27575
10338015 2.27184
10338016 7.68726
10338017 12.5763
10338018 6.73192
10338019 4.69364
10338020 8.44063

Total number of rows: 35557

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM346688.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM346688.chp.gz 266.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap