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Sample GSM365217 Query DataSets for GSM365217
Status Public on Jul 01, 2009
Title DM009
Sample type RNA
 
Source name Whole blood from non-infected patient with type 2 diabetes
Organism Homo sapiens
Characteristics Age: 50
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/type 2 diabetes
Treatment:
Pathogen:
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol HumanHT-12 Expression BeadChip
Scan protocol Illumina BeadScan Version 3.5.49.29917 (This information is in the .XML file)
Description The subject diagnosted type 2 diabetes
Data processing The data were analysed using BeadStudio version 3.1.3.0 using the average chip normalization method.
 
Submission date Jan 28, 2009
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) DChaussabel@benaroyaresearch.org
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -5.097641 0.8339921
ILMN_2055271 9.981993 0.03820817
ILMN_1736007 -1.022687 0.5401844
ILMN_2383229 7.101799 0.085639
ILMN_1806310 -2.276882 0.6376812
ILMN_1779670 0.08209196 0.4677207
ILMN_2321282 5.446051 0.1422925
ILMN_1671474 1.943343 0.3280632
ILMN_1772582 -1.145479 0.5507246
ILMN_1735698 2.96387 0.2674572
ILMN_1653355 19.9264 0.007905139
ILMN_1717783 -5.533319 0.8603426
ILMN_1705025 8.283202 0.05797102
ILMN_1814316 -0.4825613 0.5032938
ILMN_2359168 3.05045 0.2608696
ILMN_1731507 -9.349591 0.9749671
ILMN_1787689 10.68481 0.03162055
ILMN_1745607 1.155322 0.3781291
ILMN_2136495 -8.264117 0.9459816
ILMN_1668111 -6.282413 0.8998682

Total number of rows: 48803

Table truncated, full table size 1466 Kbytes.




Supplementary file Size Download File type/resource
GSM365217.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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