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Sample GSM365220 Query DataSets for GSM365220
Status Public on Jul 01, 2009
Title DM012
Sample type RNA
 
Source name Whole blood from non-infected patient with type 2 diabetes
Organism Homo sapiens
Characteristics Age: 57
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/type 2 diabetes
Treatment:
Pathogen:
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol HumanHT-12 Expression BeadChip
Scan protocol Illumina BeadScan Version 3.5.49.29917 (This information is in the .XML file)
Description The subject diagnosted type 2 diabetes
Data processing The data were analysed using BeadStudio version 3.1.3.0 using the average chip normalization method.
 
Submission date Jan 28, 2009
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) DChaussabel@benaroyaresearch.org
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -7.533818 0.9459816
ILMN_2055271 -1.146654 0.5428195
ILMN_1736007 -1.805976 0.6100132
ILMN_2383229 1.261186 0.3675889
ILMN_1806310 -10.60636 0.9855072
ILMN_1779670 -1.638591 0.5889328
ILMN_2321282 4.933231 0.1607378
ILMN_1671474 8.60708 0.05006588
ILMN_1772582 -0.08026361 0.458498
ILMN_1735698 5.077425 0.1567852
ILMN_1653355 19.78968 0.002635046
ILMN_1717783 7.435431 0.07378129
ILMN_1705025 6.321357 0.0974967
ILMN_1814316 -1.790673 0.6086956
ILMN_2359168 -1.989648 0.6192358
ILMN_1731507 -2.926156 0.7101449
ILMN_1787689 -3.961687 0.7852437
ILMN_1745607 -6.930002 0.9328063
ILMN_2136495 -1.658385 0.5902503
ILMN_1668111 -1.558423 0.5823452

Total number of rows: 48803

Table truncated, full table size 1479 Kbytes.




Supplementary file Size Download File type/resource
GSM365220.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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