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GEO accession:
Sample GSM380312
Query DataSets for GSM380312
Status
Public on Jun 01, 2009
Title
TAF4b knockout 2
Sample type
RNA
Source name
TAF4b knockout
Organism
Mus musculus
Characteristics
genotype: TAF4b knockout
Extracted molecule
total RNA
Extraction protocol
RNA was isolated using Trizol reagent
Label
biotin
Label protocol
Affymetrix Whole-transcript Sense Target Labeling Assay (Rev3)
Hybridization protocol
per instructions of GeneChip Mouse gene 1.0 ST array
Scan protocol
Affymetrix Expression Console v1.1
Description
n/a
Data processing
RMA-sketch
Submission date
Mar 13, 2009
Last update date
Mar 13, 2009
Contact name
Lindsay Lovasco
E-mail(s)
lindsay_lovasco@brown.edu
Organization name
Brown University
Department
MCB
Lab
Freiman Lab
Street address
70 Ship St.
City
Providence
State/province
RI
ZIP/Postal code
02903
Country
USA
Platform ID
GPL6246
Series (1)
GSE15228
Gene expression differences between TAF4b-KO, Het and WT ovaries at 3 weeks of age
Data table header descriptions
ID_REF
VALUE
RMA signal
Data table
ID_REF
VALUE
10344614
78.88876
10344616
6.633971
10344620
13.70111
10344622
153.6017
10344624
898.0742
10344633
1388.944
10344637
355.6468
10344653
25.30991
10344658
484.025
10344674
12.44894
10344679
35.2501
10344707
446.296
10344713
2823.06
10344715
15.35273
10344717
23.15041
10344719
81.34187
10344721
5.353786
10344723
1336.455
10344725
378.4128
10344741
3925.092
Total number of rows:
28266
Table truncated, full table size
493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM380312.CEL.gz
4.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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