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Sample GSM383680 Query DataSets for GSM383680
Status Public on Mar 20, 2009
Title SAGE_Bone_marrow_AML_FS_CD34+CD38+
Sample type SAGE
Anchor NlaIII
Tag Count 16808
Tag Length 10
 
Source name bone marrow, acute myelogenous leukemia, flow-sorted, extracted short sage
Organism Homo sapiens
Characteristics organ/tissue: bone marrow
tissue preparation: flow-sorted
sex: unknown
cell type: Acute myelogenous leukemia
Biomaterial provider Robert Georgantas and Curt Civin, Johns Hopkins School of Medicine
Extracted molecule total RNA
Extraction protocol N/A
 
Description CGAP_Numeric_library_ID: 1503
Tagging_enzyme: Mme I
Library_producer: Jennifer Edwards
Laboratory: Gregory Riggins, Johns Hopkins Department of Neurosurgery
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL4
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309 Cancer Genome Anatomy Project (CGAP) Human SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAACCCA 1 59.50
AAAAAACTCC 1 59.50
AAAAACGCAC 1 59.50
AAAAACGGGC 1 59.50
AAAAAGATGT 1 59.50
AAAAAGCAGA 7 416.47
AAAAATAAAG 2 118.99
AAAAATAAAT 1 59.50
AAAAATCGGC 1 59.50
AAAAATCGGT 1 59.50
AAAAATGAAT 1 59.50
AAAAATGGAT 1 59.50
AAAAATTCAT 1 59.50
AAAAATTGAA 1 59.50
AAAAATTGGA 5 297.48
AAAACAAAGA 1 59.50
AAAACAAATA 1 59.50
AAAACAGCAA 2 118.99
AAAACAGTGG 1 59.50
AAAACATTAT 1 59.50

Total number of rows: 8370

Table truncated, full table size 157 Kbytes.




Supplementary data files not provided

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