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Sample GSM383682 Query DataSets for GSM383682
Status Public on Mar 20, 2009
Title SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-
Sample type SAGE
Anchor NlaIII
Tag Count 86391
Tag Length 10
 
Source name bone marrow, normal, antibody purified, short sage
Organism Homo sapiens
Characteristics organ/tissue: bone marrow
tissue preparation: antibody purified
sex: unknown
cell type: normal bone marrow
Biomaterial provider National Heart, Lung, and Blood Institute; Cell Procurement Bank
Extracted molecule total RNA
Extraction protocol N/A
 
Description CGAP_Numeric_library_ID: 409
Tagging_enzyme: BsmF I
Library_producer: Robert Georgantas
Laboratory: Curt I Civin Laboratory at Johns Hopkins Medical Institute
References: R.W. Georgantas et al., Cancer Research 64, 4434-41 (2004) [PUBMED=15231652]
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL4
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309 Cancer Genome Anatomy Project (CGAP) Human SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 14 162.05
AAAAAAAAAG 1 11.58
AAAAAAAAGA 2 23.15
AAAAAAAATG 1 11.58
AAAAAAAGTG 1 11.58
AAAAAAATCA 4 46.30
AAAAAAATTC 1 11.58
AAAAAACATT 3 34.73
AAAAAACCCA 11 127.33
AAAAAACTCC 5 57.88
AAAAAAGAAA 2 23.15
AAAAAAGGTA 1 11.58
AAAAAATAAA 2 23.15
AAAAAATGCA 1 11.58
AAAAAATGCT 1 11.58
AAAAAATGGG 1 11.58
AAAAAATGGT 5 57.88
AAAAAATTTG 1 11.58
AAAAACATTC 9 104.18
AAAAACCACA 1 11.58

Total number of rows: 22441

Table truncated, full table size 418 Kbytes.




Supplementary data files not provided

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