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| Status |
Public on Mar 20, 2009 |
| Title |
SAGE_Brain_meningioma_grade_II_B_SF3622 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
44857 |
| Tag Length |
10 |
| |
|
| Source name |
brain, meningioma, grade ii, malignant, bulk, short sage
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: brain
tissue preparation: bulk
sex: unknown
cell type: atypical meningioma
|
| Biomaterial provider |
Brain Tumor Tissue Bank, University of California, San Francisco
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
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| Description |
CGAP_Numeric_library_ID: 527
Tagging_enzyme: BsmF I
Library_producer: Anita Lal
Laboratory: Meningioma Research Laboratory, UCSF
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
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| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
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| Department |
Cancer Genome Anatomy Project
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| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL4 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15309 |
Cancer Genome Anatomy Project (CGAP) Human SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
5 |
111.47 |
| AAAAAAAAAG |
1 |
22.29 |
| AAAAAAAACC |
1 |
22.29 |
| AAAAAAAAGG |
1 |
22.29 |
| AAAAAAACAA |
1 |
22.29 |
| AAAAAAACCC |
1 |
22.29 |
| AAAAAAAGAA |
1 |
22.29 |
| AAAAAAAGCA |
1 |
22.29 |
| AAAAAAATCA |
1 |
22.29 |
| AAAAAAATGC |
1 |
22.29 |
| AAAAAAATTC |
1 |
22.29 |
| AAAAAACCCA |
6 |
133.76 |
| AAAAAACTAC |
1 |
22.29 |
| AAAAAACTCC |
2 |
44.59 |
| AAAAAATCGA |
1 |
22.29 |
| AAAAAATGAA |
1 |
22.29 |
| AAAAAATGTT |
1 |
22.29 |
| AAAAAATTTG |
1 |
22.29 |
| AAAAACACCC |
1 |
22.29 |
| AAAAACCATA |
1 |
22.29 |
Total number of rows: 16264
Table truncated, full table size 303 Kbytes.
| Supplementary data files not provided |
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