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| Status |
Public on Mar 20, 2009 |
| Title |
SAGE_Esophagus_Normal_B_CN01 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
75634 |
| Tag Length |
10 |
| |
|
| Source name |
other, bulk, normal, esophagus, extracted short sage, adult, male
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: other
tissue preparation: bulk
age: 69
sex: male
|
| Biomaterial provider |
Dr. Mimi Canto, Dr. Jean Wang, and Dr. Elizabeth Montgomery
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
CGAP_Numeric_library_ID: 2104
Tagging_enzyme: Mme I
Library_producer: Dr. Hector Alvarez
Laboratory: Dr. Gregory Riggins and Dr. Anirban Maitra
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
|
| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
|
| Platform ID |
GPL4 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15309 |
Cancer Genome Anatomy Project (CGAP) Human SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
5 |
66.11 |
| AAAAAAAACC |
1 |
13.22 |
| AAAAAAAATA |
1 |
13.22 |
| AAAAAAAATG |
2 |
26.44 |
| AAAAAAACCA |
2 |
26.44 |
| AAAAAAACCC |
3 |
39.66 |
| AAAAAAAGAA |
1 |
13.22 |
| AAAAAAAGGC |
1 |
13.22 |
| AAAAAAATCA |
2 |
26.44 |
| AAAAAAATGT |
1 |
13.22 |
| AAAAAACAAA |
1 |
13.22 |
| AAAAAACCAA |
1 |
13.22 |
| AAAAAACCCA |
13 |
171.88 |
| AAAAAACGTT |
1 |
13.22 |
| AAAAAACTCC |
2 |
26.44 |
| AAAAAACTGG |
1 |
13.22 |
| AAAAAAGATA |
1 |
13.22 |
| AAAAAAGCAA |
1 |
13.22 |
| AAAAAAGCCA |
1 |
13.22 |
| AAAAAAGCCT |
1 |
13.22 |
Total number of rows: 28689
Table truncated, full table size 534 Kbytes.
| Supplementary data files not provided |
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