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Sample GSM383938 Query DataSets for GSM383938
Status Public on Mar 20, 2009
Title SAGE_Pancreas_normal_CS_H126
Sample type SAGE
Anchor NlaIII
Tag Count 32223
Tag Length 10
 
Source name pancreas, epithelium, ductal, normal, short term culture, non-normalized, short sage
Organism Homo sapiens
Characteristics organ/tissue: pancreas
tissue preparation: short term culture
sex: unknown
cell type: normal ductal
Biomaterial provider M.A. Hollingsworth
Extracted molecule total RNA
Extraction protocol N/A
 
Description CGAP_Numeric_library_ID: 66
Tagging_enzyme: BsmF I
Old_library_name: SAGE_H126
Library_producer: Byung Woo Ryu
Laboratory: Scott Kern, Johns Hopkins Medical Institute
References: B. Ryu et al., Cancer Res 62, 819-26 (2002) [PUBMED=11830538]|P. Argani et al., Cancer Res 61, 4320-4 (2001) [PUBMED=11389052]
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL4
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309 Cancer Genome Anatomy Project (CGAP) Human SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 1 31.03
AAAAAAAAAG 1 31.03
AAAAAAAAGA 1 31.03
AAAAAACCCA 1 31.03
AAAAAACTCC 1 31.03
AAAAAAGCTC 1 31.03
AAAAAATATT 1 31.03
AAAAAATCCC 1 31.03
AAAAAATCTG 1 31.03
AAAAACTCCA 1 31.03
AAAAATGGTA 1 31.03
AAAAATGGTT 1 31.03
AAAAATTGGA 1 31.03
AAAACAAAAC 1 31.03
AAAACAAGTG 2 62.07
AAAACACTCA 1 31.03
AAAACAGTGG 1 31.03
AAAACATTCT 4 124.13
AAAACCTAAA 1 31.03
AAAACTCAAG 2 62.07

Total number of rows: 12360

Table truncated, full table size 231 Kbytes.




Supplementary data files not provided
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