GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
SAGE_Peritoneum_mesothelioma_B_12
Sample type
SAGE
Anchor
NlaIII
Tag Count
32529
Tag Length
10
Source name
peritoneum, epithelium, malignant, mesothelioma, bulk, non-normalized, short SAGE
Organism
Homo sapiens
Characteristics
organ/tissue: peritoneum tissue preparation: bulk sex: unknown cell type: malignant peritoneal mesothelioma other information: Pimary malignant mesothelioma (Pure epithelial)
Biomaterial provider
Patrice Morin
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 93 Tagging_enzyme: BsmF I Old_library_name: SAGE_Meso-12 Laboratory: Pat Morin, National Institute on Aging, NIH References: C. D. Hough et al., Cancer Res 60, 6281-7 (2000) [PUBMED=11103784]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
105
3227.89
AAAAAAAAAC
1
30.74
AAAAAAAAAG
1
30.74
AAAAAAAAGA
2
61.48
AAAAAAAATG
1
30.74
AAAAAAAATT
1
30.74
AAAAAAAGAA
1
30.74
AAAAAAATCA
1
30.74
AAAAAAATGA
1
30.74
AAAAAACAAA
1
30.74
AAAAAACACA
1
30.74
AAAAAACCCA
3
92.23
AAAAAACTGG
1
30.74
AAAAAAGAAA
1
30.74
AAAAAATAAA
4
122.97
AAAAAATCGA
1
30.74
AAAAAATGGA
1
30.74
AAAAAATGGT
1
30.74
AAAAACCCTT
3
92.23
AAAAACCTCA
1
30.74
Total number of rows: 14103 Table truncated, full table size 263 Kbytes .Supplementary data files not provided