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GEO accession:
Sample GSM384046
Query DataSets for GSM384046
Status
Public on Mar 20, 2009
Title
LSAGE_Brain_fetal_normal_B_S1
Sample type
SAGE
Anchor
NlaIII
Tag Count
305546
Tag Length
17
Source name
brain, normal, bulk, fetus, long SAGE
Organism
Homo sapiens
Characteristics
organ/tissue: brain
tissue preparation: bulk
age: Spontaneously aborted male/female Caucasian fetuses, ages 20-33 weeks
sex: unknown
Biomaterial provider
Clonetech Laboratories
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 656
Tagging_enzyme: Mme I
Library_producer: Brad St. Croix
Laboratory: Molecular Genetics Lab at Johns Hopkins Oncology Center
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE1902
Cancer Genome Anatomy Project (CGAP) Human LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
187
612.02
AAAAAAAAAAAAAAAAC
16
52.37
AAAAAAAAAAAAAAAAG
29
94.91
AAAAAAAAAAAAAAAAT
16
52.37
AAAAAAAAAAAAAAACA
3
9.82
AAAAAAAAAAAAAAACC
3
9.82
AAAAAAAAAAAAAAACG
1
3.27
AAAAAAAAAAAAAAACT
1
3.27
AAAAAAAAAAAAAAAGA
4
13.09
AAAAAAAAAAAAAAAGC
1
3.27
AAAAAAAAAAAAAAAGG
4
13.09
AAAAAAAAAAAAAAAGT
1
3.27
AAAAAAAAAAAAAAATA
2
6.55
AAAAAAAAAAAAAAATC
1
3.27
AAAAAAAAAAAAAAATT
1
3.27
AAAAAAAAAAAAAACAG
1
3.27
AAAAAAAAAAAAAACCG
1
3.27
AAAAAAAAAAAAAAGAA
1
3.27
AAAAAAAAAAAAAAGAG
2
6.55
AAAAAAAAAAAAAAGAT
1
3.27
Total number of rows:
113723
Table truncated, full table size
2793 Kbytes
.
Supplementary data files not provided
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