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Status |
Public on Mar 20, 2009 |
Title |
LSAGE_Breast_normal_epithelium_CD44+_AP_N5 |
Sample type |
SAGE |
Anchor |
NlaIII
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Tag Count |
80464 |
Tag Length |
17 |
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Source name |
human, breast/mammary gland, antibody purified, normal, normal breast tissue reduction, cd44+ mammary epithelial cells, female, adult, long sage
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Organism |
Homo sapiens |
Characteristics |
organ/tissue: mammary gland tissue preparation: antibody purified age: 58 sex: female cell type: Normal breast tissue reduction other information: cells purified using CD44 antibody, these cells are CD44+ mammary epithelial stem cells
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Biomaterial provider |
Andrea Richardson, MD,PhD, BWH
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Extracted molecule |
total RNA |
Extraction protocol |
N/A
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Description |
CGAP_Numeric_library_ID: 2391 Tagging_enzyme: Mme I Library_producer: Noga Qimron MSc/ MIn Hu PhD, DFCI Laboratory: Polyak Lab, DFCI
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Submission date |
Mar 19, 2009 |
Last update date |
Mar 20, 2009 |
Contact name |
Cancer Genome Anatomy Project CGAP |
E-mail(s) |
cgapbs-r@mail.nih.gov
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Phone |
301-496-1550
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URL |
http://cgap.nci.nih.gov/
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Organization name |
National Cancer Institute
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Department |
Cancer Genome Anatomy Project
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Street address |
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
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Platform ID |
GPL1485 |
Series (2) |
GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
GSE1902 |
Cancer Genome Anatomy Project (CGAP) Human LongSAGE |
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Data table header descriptions |
TAG |
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COUNT |
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TPM |
tags per million |
Data table |
TAG |
COUNT |
TPM |
AAAAAAAAAAAAAAAAA |
6 |
74.57 |
AAAAAAAAAAAAAAAAG |
1 |
12.43 |
AAAAAAAAAAAAAAAAT |
1 |
12.43 |
AAAAAAAAAAAAAAAGG |
1 |
12.43 |
AAAAAAAAAAAAAAGCA |
1 |
12.43 |
AAAAAAAAAAAGTCTCC |
1 |
12.43 |
AAAAAAAAATAGAAAAA |
1 |
12.43 |
AAAAAAAAGAAGTTTTG |
1 |
12.43 |
AAAAAAAATGAAGTAGG |
1 |
12.43 |
AAAAAAAATGGATGAAT |
1 |
12.43 |
AAAAAAAATTTTTAAAT |
1 |
12.43 |
AAAAAAATTTCCAATAA |
1 |
12.43 |
AAAAAAATTTCCAATGA |
6 |
74.57 |
AAAAAACCCAACCCAAA |
1 |
12.43 |
AAAAAACCCAACCCAGA |
1 |
12.43 |
AAAAAACTACATAAAAA |
1 |
12.43 |
AAAAAACTACATAAAAC |
1 |
12.43 |
AAAAAACTCCATATAAC |
1 |
12.43 |
AAAAAACTGAGGTCCTG |
1 |
12.43 |
AAAAAAGCTCAACATCA |
1 |
12.43 |
Total number of rows: 35720
Table truncated, full table size 908 Kbytes.
Supplementary data files not provided |
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