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| Status |
Public on Mar 20, 2009 |
| Title |
LSAGE_Muscle_Rhabdomyosarcoma_B_1 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
61270 |
| Tag Length |
17 |
| |
|
| Source name |
long sage, muscle, juvenile, male, rhabdomyosarcoma, bulk
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: muscle
tissue preparation: bulk
age: 5
sex: male
cell type: rhabdomyosarcoma
|
| Biomaterial provider |
CHTN Pediatric Division
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
CGAP_Numeric_library_ID: 1923
Tagging_enzyme: Mme I
Library_producer: Jennifer B. Edwards
Laboratory: Gregory Riggins, M.D., Ph.D
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL1485 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE1902 |
Cancer Genome Anatomy Project (CGAP) Human LongSAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAAAAAAAAA |
29 |
473.31 |
| AAAAAAAAAAAAAAAAC |
1 |
16.32 |
| AAAAAAAAAAAAAAAAG |
2 |
32.64 |
| AAAAAAAAAAAAAAAAT |
2 |
32.64 |
| AAAAAAAAAAGAAAAAG |
1 |
16.32 |
| AAAAAAAAGAAGTTTTG |
1 |
16.32 |
| AAAAAAAAGAGAAAAAA |
1 |
16.32 |
| AAAAAAAATGAAGTAGG |
3 |
48.96 |
| AAAAAAACAACATTCTG |
1 |
16.32 |
| AAAAAAAGAGATGTTAA |
1 |
16.32 |
| AAAAAAAGGGGAAAATT |
1 |
16.32 |
| AAAAAAAGTCAAAAACA |
1 |
16.32 |
| AAAAAAATATACTTGCT |
1 |
16.32 |
| AAAAAAATCAAATTTTT |
1 |
16.32 |
| AAAAAACAGCAACTGGC |
1 |
16.32 |
| AAAAAACATTTCAGGAG |
3 |
48.96 |
| AAAAAACCCAACCCAAA |
2 |
32.64 |
| AAAAAACCCAACCCAGA |
3 |
48.96 |
| AAAAAACCCAACCCAGT |
1 |
16.32 |
| AAAAAACTCCAAACAAG |
1 |
16.32 |
Total number of rows: 27380
Table truncated, full table size 696 Kbytes.
| Supplementary data files not provided |
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