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Sample GSM384244 Query DataSets for GSM384244
Status Public on Mar 20, 2009
Title mSAGE_Cerebellum_percoll_GCP
Sample type SAGE
Anchor NlaIII
Tag Count 61124
Tag Length 10
 
Source name cerebellum, granule cell, progenitor, normal, short sage, 8 days post natal
Organism Mus musculus
Characteristics organ/tissue: cerebellum
tissue preparation: other
age: postnatal day 8
sex: unknown
cell type: normal granular cell precursors
mutations: none
other information: Granular cell precursor cells from normal, 8-day old mice were purified by enzymatic digestion and percoll gradient centrifugation, pelleted and snap-frozen.
Biomaterial provider Robert Wechsler-Reya, Ph.D.
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: BsmF I
CGAP_Numeric_library_ID: 905
Library_producer: Christopher Turner, M.D.
Laboratory: Gregory J. Riggins, MD PhD
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 125 2045.02
AAAAAAAAAC 3 49.08
AAAAAAAAAG 2 32.72
AAAAAAAAGG 1 16.36
AAAAAAAATA 1 16.36
AAAAAAAATG 1 16.36
AAAAAAACTA 4 65.44
AAAAAAACTT 1 16.36
AAAAAAAGAA 1 16.36
AAAAAAATAA 1 16.36
AAAAAAATAG 3 49.08
AAAAAAATAT 1 16.36
AAAAAACATT 1 16.36
AAAAAACCCA 1 16.36
AAAAAAGAAA 2 32.72
AAAAAAGAAC 1 16.36
AAAAAAGAAT 1 16.36
AAAAAAGGAA 1 16.36
AAAAAAGGCC 1 16.36
AAAAAAGTCT 1 16.36

Total number of rows: 24741

Table truncated, full table size 461 Kbytes.




Supplementary data files not provided
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