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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Lymph_nodes_normal_P84_MMD_SM130 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
111401 |
| Tag Length |
10 |
| |
|
| Source name |
lymph node, normal, microscope dissected, extracted short sage, 84 days post natal
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: lymph node
tissue preparation: microscope dissected
age: P84
sex: unknown
other information: lymph nodes, mesenteric
|
| Biomaterial provider |
Cheryl Helgason Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1735
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
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| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
112 |
1005.38 |
| AAAAAAAAAG |
3 |
26.93 |
| AAAAAAAAAT |
1 |
8.98 |
| AAAAAAAAGA |
1 |
8.98 |
| AAAAAAAAGT |
1 |
8.98 |
| AAAAAAAATA |
6 |
53.86 |
| AAAAAAAATT |
3 |
26.93 |
| AAAAAAACCA |
1 |
8.98 |
| AAAAAAACTA |
4 |
35.91 |
| AAAAAAAGAA |
1 |
8.98 |
| AAAAAAAGTT |
1 |
8.98 |
| AAAAAAATAA |
4 |
35.91 |
| AAAAAAATAG |
2 |
17.95 |
| AAAAAAATTA |
1 |
8.98 |
| AAAAAAATTT |
1 |
8.98 |
| AAAAAACAAA |
2 |
17.95 |
| AAAAAACAAT |
1 |
8.98 |
| AAAAAACACA |
1 |
8.98 |
| AAAAAACCAA |
1 |
8.98 |
| AAAAAACCAG |
1 |
8.98 |
Total number of rows: 29609
Table truncated, full table size 532 Kbytes.
| Supplementary data files not provided |
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