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Sample GSM4051372 Query DataSets for GSM4051372
Status Public on Oct 17, 2019
Title TH 397
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics disease state: Univentricular Patient
tissue: blood
Extracted molecule total RNA
Extraction protocol Total RNA including miRNAs was isolated using the Qiagen PAXgene™ Blood miRNA according to manufacturers recommendations.
Label using miRNA Complete Labeling and Hyb Kit (Agilent, Cat. No 5190-0456), Cyanine 3-pcp
Label protocol The expression profile of 2549 human miRNAs was determined using SurePrint G3 8x60k miRNA microarrays (Agilent) according to the manufacturers recommendations
 
Hybridization protocol The expression profile of 2549 human miRNAs was determined using SurePrint G3 8x60k miRNA microarrays (Agilent) according to the manufacturers recommendations
Scan protocol Array´s were scanned with the Agilent Scanner with default settings.
Description univentricular heart (UVH)
Data processing Raw expression values were extracted using the Feature Extraction Software of Agilent. Raw signal intensities were quantil-normalized
 
Submission date Aug 28, 2019
Last update date Oct 17, 2019
Contact name Masood Abu-Halima
E-mail(s) masood@daad-alumni.de
Organization name Univeristy of Saarland
Department Human Genetics
Lab 1.06
Street address Kirrberger St 60
City Homburg Saar
ZIP/Postal code 66421
Country Germany
 
Platform ID GPL25134
Series (1)
GSE136547 Micro-RNA 150-5p predicts overt heart failure in patients with univentricular hearts

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
hsa-miR-495-3p 1.59
hsa-miR-1976 1.18
hsa-miR-6879-5p 5.81
hsa-miR-1973 1.38
hsa-miR-6864-5p 1.08
hsa-miR-3065-3p 1.34
hsa-miR-548am-5p 1.76
hsa-miR-4778-3p 0.61
hsa-miR-15a-3p 2.12
hsa-miR-1914-3p 4.21
hsa-miR-4999-3p 0.79
hsa-miR-6873-3p 1.40
hsa-miR-6841-5p 0.86
hsa-miR-552-5p 0.98
hsa-miR-6817-5p 1.11
hsa-miR-4633-5p 0.78
hsa-miR-4704-3p 1.33
hsa-miR-671-3p 0.97
hsa-miR-514a-3p 1.01
hsa-miR-1972 1.16

Total number of rows: 2549

Table truncated, full table size 49 Kbytes.




Supplementary file Size Download File type/resource
GSM4051372_US11153896_257015614696_S01_miRNA_107_Sep09_1_2.txt.gz 7.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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