|
| Status |
Public on Aug 20, 2009 |
| Title |
HeLa-siControl-H4K16ac-HDACi-1h |
| Sample type |
SRA |
| |
|
| Source name |
HeLa cell
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: HeLa cell
antibody: anti-H4K16ac Ab
sirna: siControl
treatment: Trichostatin + sodium butyrate for 1 hours
|
| Treatment protocol |
Treatment protocol as described in Wang et al., 2009
|
| Growth protocol |
Growth protocol as described in Wang et al., 2009
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extract protocol as described in Wang et al., 2009
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
Illumina Genome Analyzer |
| |
|
| Description |
HeLa siControl H4K16ac w/ TSA+Bu 1h
ChIP-Seq, genomic DNA
|
| Data processing |
Sequence reads were obtained and mapped to the human (March 2006, hg18) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Wang et al., 2009
|
| |
|
| Submission date |
Jun 18, 2009 |
| Last update date |
May 15, 2019 |
| Contact name |
Chongzhi Zang |
| Organization name |
University of Virginia
|
| Street address |
P. O. Box 800717
|
| City |
Charlottesville |
| State/province |
VA |
| ZIP/Postal code |
22908 |
| Country |
USA |
| |
|
| Platform ID |
GPL9052 |
| Series (1) |
| GSE15735 |
Genome-wide mapping of HATs and HDACs in human CD4+ T cells |
|
| Relations |
| SRA |
SRX017727 |
| BioSample |
SAMN00009902 |
