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Sample GSM419928 Query DataSets for GSM419928
Status Public on Jun 23, 2010
Title RAW 264.7, Unstimulated, miR-155
Sample type RNA
 
Source name RAW 264.7, Unstimulated, miR-155
Organism Mus musculus
Characteristics cell line: RAW 264.7
Extracted molecule total RNA
Extraction protocol RNeasy (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol for the Mouse 1.0ST arrays from 100ng total RNA.
 
Hybridization protocol As per standard Affymetrix protocol for the Mouse 1.0ST arrays.
Scan protocol Arrays were scanned on a DNA microarray Agilent Scanner
Description RAW 264.7 transfected with miR-155 expressing vector
Data processing Quantile normalisation and Robust Multichip Average (RMA) background correction adjusting for probe sequence (Partek Software) was used to generate gene expression levels from the Mouse Gene 1.0ST arrays.
 
Submission date Jun 23, 2009
Last update date Jun 25, 2009
Contact name Omer Barad
E-mail(s) omer.barad@weizmann.ac.il
Organization name Weizmann Institute of Science
Street address Herzel
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL6246
Series (1)
GSE16749 miR-155 role in osteoclast differentiation

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
10338001 12.1598
10338002 7.18217
10338003 10.7873
10338004 9.72357
10338005 2.55145
10338006 2.86854
10338007 3.26395
10338008 3.95345
10338009 9.81443
10338010 2.65659
10338011 6.33415
10338012 2.75242
10338013 2.46336
10338014 2.49672
10338015 2.44235
10338016 8.69868
10338017 13.1579
10338018 7.70295
10338019 5.64824
10338020 9.75692

Total number of rows: 35557

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM419928.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM419928.CHP.gz 269.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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