|
Status |
Public on Jun 25, 2023 |
Title |
HCC_adjacent_sample_S114_Pt57 |
Sample type |
genomic |
|
|
Source name |
Hepatocellular carcinoma adjacent tissue
|
Organism |
Homo sapiens |
Characteristics |
disease state: Hepatocellular Carcinoma tissue: Liver adjacent
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Extraction of genomic DNA from fresh frozen tissue was performed with the ChargeSwitch gDNA Mini Tissue Kits (Invitrogen, CS11204)
|
Label |
C-Bio and A-DNP
|
Label protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
|
|
Hybridization protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
Scan protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
Data processing |
Genomic DNA extracted from the samples was genotyped using HumanOmniExpressExome-8v1_A (Illumina). Genotype: AA,AB,BB,or empty (no call)
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|
|
Submission date |
Jun 26, 2020 |
Last update date |
Jun 25, 2023 |
Contact name |
Roser Pinyol |
E-mail(s) |
rpinyol@clinic.cat
|
Organization name |
IDIBAPS
|
Street address |
C/Rosselló
|
City |
Barcelona |
ZIP/Postal code |
08036 |
Country |
Spain |
|
|
Platform ID |
GPL16333 |
Series (1) |
GSE153338 |
Copy number alteration burden differentially impacts immune profiles and molecular features of hepatocellular carcinoma |
|