|
| Status |
Public on Jun 25, 2023 |
| Title |
HCC_adjacent_sample_S194_Pt97 |
| Sample type |
genomic |
| |
|
| Source name |
Hepatocellular carcinoma adjacent tissue
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Hepatocellular Carcinoma
tissue: Liver adjacent
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extraction of genomic DNA from fresh frozen tissue was performed with the ChargeSwitch gDNA Mini Tissue Kits (Invitrogen, CS11204)
|
| Label |
C-Bio and A-DNP
|
| Label protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
| |
|
| Hybridization protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
| Scan protocol |
Following Illumina HumanOmniExpressExome-8v1_A kit-associated protocol.
|
| Data processing |
Genomic DNA extracted from the samples was genotyped using HumanOmniExpressExome-8v1_A (Illumina).
Genotype: AA,AB,BB,or empty (no call)
|
| |
|
| Submission date |
Jun 26, 2020 |
| Last update date |
Jun 25, 2023 |
| Contact name |
Roser Pinyol |
| E-mail(s) |
rpinyol@clinic.cat
|
| Organization name |
IDIBAPS
|
| Street address |
C/Rosselló
|
| City |
Barcelona |
| ZIP/Postal code |
08036 |
| Country |
Spain |
| |
|
| Platform ID |
GPL16333 |
| Series (1) |
| GSE153338 |
Copy number alteration burden differentially impacts immune profiles and molecular features of hepatocellular carcinoma |
|
