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Sample GSM495888 Query DataSets for GSM495888
Status Public on Apr 01, 2010
Title ACT10
Sample type RNA
 
Source name ACT
Organism Homo sapiens
Characteristics tissue: Adrenal cortex
disease state: adrenocortical tumor
Extracted molecule total RNA
Extraction protocol RNA was extracted using the miRNeasy Mini Kit (Qiagen).
Label Cy5
Label protocol RNA was labelled according to the manufacturer's instructions.
 
Hybridization protocol Hybridization was performed according to the manufacturer's instructions.
Scan protocol Slides were scanned on an Agilent microarray scanner (model G2565A) at 100% and 5% sensitivity settings. Agilent Feature Extraction software version 8.1 was used for image analysis.
Description miRNA profiling in ACT samples
Data processing No normalization was applied to signal intensity data.
 
Submission date Jan 12, 2010
Last update date Jan 19, 2010
Contact name Enzo LALLI
E-mail(s) ninino@ipmc.cnrs.fr
Phone +33 (0)4 93 95 77 55
Organization name IPMC
Department CNRS UMR 7275
Lab 402
Street address 660 route des Lucioles
City Valbonne
ZIP/Postal code 06560
Country France
 
Platform ID GPL8227
Series (1)
GSE19856 Study of miRNA expression in childhood adrenocortical tumors

Data table header descriptions
ID_REF
VALUE total signal

Data table
ID_REF VALUE
DarkCorner 5.26386
NC1_00000197 -3.09636
NC1_00000215 1.79909
NC2_00079215 -8.53559
NC2_00092197 -2.49251
NC2_00106057 -4.82484
NC2_00122731 -9.40505
NegativeControl -110.328
SCorner3 2.00675
dmr_285 0.194956
dmr_3 -0.0610204
dmr_308 0.0380045
dmr_316 0.329248
dmr_31a -1.44641
dmr_6 1.8384
ebv-miR-BART1-3p 0.20587
ebv-miR-BART1-5p 1.47764
ebv-miR-BART10 5.61058
ebv-miR-BART10* -2.99264
ebv-miR-BART11-3p 2.83035

Total number of rows: 821

Table truncated, full table size 17 Kbytes.




Supplementary file Size Download File type/resource
GSM495888.txt.gz 9.4 Kb (ftp)(http) TXT
Processed data not provided for this record

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