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Sample GSM495900 Query DataSets for GSM495900
Status Public on Apr 01, 2010
Title ACT22
Sample type RNA
 
Source name ACT
Organism Homo sapiens
Characteristics tissue: Adrenal cortex
disease state: adrenocortical tumor
Extracted molecule total RNA
Extraction protocol RNA was extracted using the miRNeasy Mini Kit (Qiagen).
Label Cy5
Label protocol RNA was labelled according to the manufacturer's instructions.
 
Hybridization protocol Hybridization was performed according to the manufacturer's instructions.
Scan protocol Slides were scanned on an Agilent microarray scanner (model G2565A) at 100% and 5% sensitivity settings. Agilent Feature Extraction software version 8.1 was used for image analysis.
Description miRNA profiling in ACT samples
Data processing No normalization was applied to signal intensity data.
 
Submission date Jan 12, 2010
Last update date Jan 19, 2010
Contact name Enzo LALLI
E-mail(s) ninino@ipmc.cnrs.fr
Phone +33 (0)4 93 95 77 55
Organization name IPMC
Department CNRS UMR 7275
Lab 402
Street address 660 route des Lucioles
City Valbonne
ZIP/Postal code 06560
Country France
 
Platform ID GPL8227
Series (1)
GSE19856 Study of miRNA expression in childhood adrenocortical tumors

Data table header descriptions
ID_REF
VALUE total signal

Data table
ID_REF VALUE
DarkCorner -10.0341
NC1_00000197 -8.82903
NC1_00000215 -4.42602
NC2_00079215 -15.0773
NC2_00092197 -11.1988
NC2_00106057 -12.0044
NC2_00122731 -12.5142
NegativeControl -127.329
SCorner3 3.08651
dmr_285 -3.28251
dmr_3 1.80811
dmr_308 0.594746
dmr_316 6.39369
dmr_31a -2.57092
dmr_6 -1.84459
ebv-miR-BART1-3p -1.23751
ebv-miR-BART1-5p 9.43536
ebv-miR-BART10 7.06537
ebv-miR-BART10* -0.702026
ebv-miR-BART11-3p 5.18443

Total number of rows: 821

Table truncated, full table size 17 Kbytes.




Supplementary file Size Download File type/resource
GSM495900.txt.gz 9.4 Kb (ftp)(http) TXT
Processed data not provided for this record

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