|
| Status |
Public on Mar 23, 2011 |
| Title |
DGCR8_wt_cortex |
| Sample type |
SRA |
| |
|
| Source name |
cortex
|
| Organism |
Mus musculus |
| Characteristics |
strain: C57BL/6
age: P21
genotype/variation: Dgcr8 het
|
| Treatment protocol |
The hippocampus and cortex were manually dissected. Total RNA was prepared with Trizol Reagent
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Libraries were constructed with the Illumina small RNA kit version 1.5
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
size fractionation |
| Instrument model |
Illumina Genome Analyzer II |
| |
|
| Description |
small RNA-Seq
|
| Data processing |
Illumina Pipeline v1.3
|
| |
|
| Submission date |
Mar 26, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Robert Blelloch |
| E-mail(s) |
blellochr@stemcell.ucsf.edu
|
| Phone |
415-476-2838
|
| Organization name |
University of California, San Francisco
|
| Street address |
513 Parnassus Avenue, Campus Box #0525
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94143 |
| Country |
USA |
| |
|
| Platform ID |
GPL9250 |
| Series (1) |
| GSE21090 |
Functional non-canonical microRNAs in the mammalian hippocampus and cortex |
|
| Relations |
| SRA |
SRX018288 |
| BioSample |
SAMN00010649 |
