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Status
Public on Mar 22, 2011
Title
Aedes aegypti salivary gland tags
Sample type
SAGE
Anchor
NlaIII
Tag Count
5924026
Tag Length
17
Source name
Aedes aegypti salivary gland tags
Organism
Aedes aegypti Characteristics
tissue: salivary gland
Extracted molecule
total RNA
Extraction protocol
TRIZOL and Magnetic beads Dynal
Description
The quality of total RNA was checked by capillary electrophoresis analysis using an Agilent BioAnalyser 2100 (Agilent, Palo Alto, CA, USA) and quantities were measured using a NanoDrop ND-1000 spectrophotometer (Thermo Scientific, Les Ulis, France).
Data processing
Generation of expression matrices, data annotation, filtering and processing were performed with BIOTAG software (Skuld-Tech, France) (Piquemal et al. Genomics 2002).
Submission date
Apr 27, 2010
Last update date
Mar 22, 2011
Contact name
David Piquemal
E-mail(s)
piquemal@univ-montp2.fr Phone
+33 610430140
Organization name
ACOBIOM
Street address
1682, rue de la Valsière
City
Montpellier
ZIP/Postal code
34184
Country
France
Platform ID
GPL10360 Series (1)
GSE21528 Induction of a peptide with activity against a broad spectrum of pathogens in the Aedes aegypti salivary gland, following infection with dengue virus
Data table header descriptions TAG COUNT TPM tags per million
Data table TAG COUNT TPM AAAAAAAAAAAAAAAAA
20614
3479.73
AAAAAAAAAAAAAAAAC
373
62.96
AAAAAAAAAAAAAAAAG
151
25.49
AAAAAAAAAAAAAAAAT
4704
794.05
AAAAAAAAAAAAAAACA
26
4.39
AAAAAAAAAAAAAAACC
24
4.05
AAAAAAAAAAAAAAACG
15
2.53
AAAAAAAAAAAAAAACT
48
8.10
AAAAAAAAAAAAAAAGA
30
5.06
AAAAAAAAAAAAAAAGC
7
1.18
AAAAAAAAAAAAAAAGG
4
0.68
AAAAAAAAAAAAAAAGT
21
3.54
AAAAAAAAAAAAAAATA
68
11.48
AAAAAAAAAAAAAAATC
690
116.47
AAAAAAAAAAAAAAATG
24
4.05
AAAAAAAAAAAAAAATT
175
29.54
AAAAAAAAAAAAAACAA
19
3.21
AAAAAAAAAAAAAACAC
2
0.34
AAAAAAAAAAAAAACAG
2
0.34
AAAAAAAAAAAAAACAT
4
0.68
189146 4642 Kbytes .Supplementary data files not provided
