|
Status |
Public on Nov 11, 2022 |
Title |
TGF_day_2 |
Sample type |
RNA |
|
|
Source name |
MCF10A cells treated with TGFbeta for 2 days
|
Organism |
Homo sapiens |
Characteristics |
cell line: MCF10A cell type: Normal breast epithelial cell line treatment: TGFbeta for 2 days
|
Treatment protocol |
10 ng/mL TGFbeta in complete growth medium for indicated time points
|
Growth protocol |
Standard culture conditions for MCF10A
|
Extracted molecule |
total RNA |
Extraction protocol |
Qiagen Rneasy kit
|
Label |
biotin
|
Label protocol |
standard Affymetrix protocol
|
|
|
Hybridization protocol |
standard Affymetrix protocol
|
Scan protocol |
standard Affymetrix protocol
|
Description |
mRNA expression
|
Data processing |
The arrays were normalized together using the Robust Multiarray Average (RMA) algorithm and a CDF (Chip Definition File) that maps the probes on the array to unique Entrez Gene identifiers
|
|
|
Submission date |
Jan 19, 2022 |
Last update date |
Nov 13, 2022 |
Contact name |
Andrew Emili |
E-mail(s) |
aemili@bu.edu
|
Organization name |
Boston University
|
Department |
Biochemistry
|
Lab |
CNSB
|
Street address |
72 East Concord St
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02118 |
Country |
USA |
|
|
Platform ID |
GPL17930 |
Series (2) |
GSE193985 |
Expression data from MCF10A cells treated with TGFβ for multiple time points [HuGene-2_0] |
GSE194019 |
Expression data from MCF10A cells treated with TGFβ for multiple time points |
|