|
Status |
Public on Apr 08, 2022 |
Title |
Blood sample from individual 256 |
Sample type |
genomic |
|
|
Source name |
Blood sample
|
Organism |
Homo sapiens |
Characteristics |
individual id: 255_256 gender: Female tissue: Blood disease state: No active inflammatory disease
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA was extracted from blood stored in EDTA tubes using the QIAamp Blood Mini kit.
|
Label |
C-Bio and A-DNP
|
Label protocol |
Standard Illumina label protocol
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
Sample ID: 256
|
Data processing |
Genomic DNA extracted from blood was genotyped using the Infinium Global Screening Array-24 v1.0 BeadChip (Illumina). Primary assessment and SNP call rate quality control of SNP intensity output files were performed using GenomeStudio software (Illumina). Genotype: AA,AB,BB,or NC (no call) Processed data file onek1k_genotype_matrix.txt.gz is linked as supplementary file at the foot of the Series record.
|
|
|
Submission date |
Feb 15, 2022 |
Last update date |
Apr 09, 2022 |
Contact name |
Joseph E Powell |
Organization name |
Garvan Institute of Medical Research
|
Street address |
384 Victoria Street
|
City |
Darlinghurst |
State/province |
NSW |
ZIP/Postal code |
2010 |
Country |
Australia |
|
|
Platform ID |
GPL28939 |
Series (2) |
GSE196829 |
Single-cell eQTL mapping identifies cell type specific genetic control of autoimmune disease [Genotype_data] |
GSE196830 |
Single-cell eQTL mapping identifies cell type specific genetic control of autoimmune disease |
|