NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM5968493 Query DataSets for GSM5968493
Status Public on Mar 01, 2023
Title Allo spleen cells CTLA4-Ig EPO 2
Sample type RNA
 
Source name splenic CD11b+ myeloid cells
Organism Mus musculus
Characteristics treatment: Allo spleen cells CTLA4-Ig EPO
cell type: splenic CD11b+ myeloid cells
Growth protocol Groups of wild type C57BL/6 mice were either untreated (naive, group D) or were injected i.p. with 20e6 allogeneic T cell depleted BALB/c splenocytes alone (group FN) with CTLA4-Ig (150µg i.p. once on day 2, Abatacept, Bristol-Myers Squibb, New York, NY, group DC), or CTLA4Ig plus recombinant EPO (5000 units/kg i.p. daily, epoetin alfa, Amgen, Thousand Oaks, CA, group DCE). On day 7, splenic CD11b+ myeloid cells were isolated by positive selection (kit #18970, STEMCELL, Vancouver, BC, Canada).
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIzol (Thermo Fisher Scientific, Waltham, MA) and cleaned using RNeasy Mini Kit (Qiagen, Hilden, Germany).
Label N/A
Label protocol N/A
 
Hybridization protocol N/A
Scan protocol N/A
Description DCE2
Data processing Gene expression profiling was then performed using the nCounter® Myeloid Innate Immunity Panel (NanoString Technologies, Seattle, WA). The normalized data were log2 transformed.
 
Submission date Mar 23, 2022
Last update date Mar 03, 2023
Contact name Weijia Zhang
E-mail(s) weijia.zhang@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Department Renal
Lab Bioinfomatics
Street address 1 Gustave L. Levy Pl
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platform ID GPL25266
Series (1)
GSE199270 Linking erythropoietin to regulatory T-cell-dependent allograft survival through myeloid cells

Data table header descriptions
ID_REF
VALUE normalized

Data table
ID_REF VALUE
Il4 3.696251232
Cx3cr1 8.921671346
Ear3 10.63876574
Ccl28 2.416143312
Nfatc2 7.509655198
Ccr7 10.29266026
Ccl22 5.674877581
Tnfaip3 11.31009485
Ptprb 2.416143312
Ccl21a 3.60878839
Trim9 3.416143312
Olr1 5.193750891
Ets1 11.13675403
Serpine1 3.778713392
Stat5a 7.743214711
Flrt2 3.068220009
Hip1r 7.147947201
Ndufa7 8.631156203
Ctla4 5.696251232
Mob3c 6.266999873

Total number of rows: 734

Table truncated, full table size 12 Kbytes.




Supplementary file Size Download File type/resource
GSM5968493_20190523_PSH_052319-1_DCE2_04.RCC.gz 8.6 Kb (ftp)(http) RCC
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap