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GEO accession:
Sample GSM61476
Query DataSets for GSM61476
Status
Public on Nov 22, 2006
Title
P300 mouse cerebellum
Sample type
SAGE
Anchor
NlaIII
Tag Count
14010
Tag Length
10
Source name
P300 C57BL6/J male mouse cerebellum
Organism
Mus musculus
Characteristics
P300 C57BL/6 normal male mouse cerebellum
Extracted molecule
total RNA
Description
C57BL/6 male mouse was sacrificed and the cerebellum was quickly removed. Total RNA was isolated using Trizol. For the creation of the library, 40micrograms of total RNA was used. cDNA was synthesized on oligo dt beads
Enzyme: NlaIII
Vector: pZERO-I
Submission date
Jun 16, 2005
Last update date
Nov 19, 2008
Contact name
Magdalena Popesco
E-mail(s)
mpopesco@hotmail.com
Phone
614-292-7747
Organization name
The Ohio State Universiy
Street address
City
Columbus
State/province
OH
ZIP/Postal code
43210
Country
USA
Platform ID
GPL11
Series (1)
GSE4520
Mouse cerebellar libraries:Ethanol-treated and controls
Data table header descriptions
TAG
Tag Sequence
COUNT
Tag Count
TPM
tags per million
Data table
TAG
COUNT
TPM
ATAATACATA
316
22555.32
ATACTGACAT
309
22055.67
GCTGCCCTCC
202
14418.27
GTGGCTCACA
88
6281.23
ACCAATGAAC
67
4782.30
AAAAAAAAAA
49
3497.50
TCAGGCTGCC
46
3283.37
GTGACCTGGC
46
3283.37
GCACAACTTG
44
3140.61
AGCAGTCCCC
40
2855.10
GTAAGCATAA
38
2712.35
CCCTTCTTCT
38
2712.35
GTAGTGGAGC
31
2212.71
TTGTTAGTGC
29
2069.95
TGTGTTGTGT
29
2069.95
TGGGTTGTCT
27
1927.19
GCTTCGTCCA
27
1927.19
GAGTGCTTTG
27
1927.19
TGGTTGCTGG
26
1855.82
TTTCCAGGTG
25
1784.44
Total number of rows:
6204
Table truncated, full table size
117 Kbytes
.
Supplementary data files not provided
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