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Sample GSM618100 Query DataSets for GSM618100
Status Public on May 22, 2013
Title Control, rep3
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics treatment: Vehicle treated cells
cell type: HUVEC
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy Plus mini kit according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description H CT 3
Data processing The data were normalised using quantile normalisation with GenomeStudio software.
 
Submission date Nov 04, 2010
Last update date May 22, 2013
Contact name Trinidad Montero
E-mail(s) t.monteromelendez@qmul.ac.uk
Organization name Whilliam Harvey Research Institute, Bart's and The London School of Medicine; Queen Mary University of London
Department Biochemical Pharmacology
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE25154 Genome-wide analysis of the affect of neutrophil-derived microparticles on HUVECs

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 121.1201 0.4298701
ILMN_2055271 142.704 0.07012987
ILMN_1736007 109.2977 0.6571429
ILMN_2383229 128.3046 0.2571429
ILMN_1806310 125.385 0.3155844
ILMN_1779670 86.58112 0.8961039
ILMN_1653355 138.8696 0.0948052
ILMN_1717783 73.6681 0.9883117
ILMN_1705025 124.2928 0.338961
ILMN_1814316 126.845 0.2844156
ILMN_2359168 88.24094 0.8662338
ILMN_1731507 84.69257 0.9207792
ILMN_1787689 97.78398 0.7753247
ILMN_3241953 385.3306 0
ILMN_1745607 101.1111 0.7480519
ILMN_2136495 85.82127 0.9064935
ILMN_1668111 140.4751 0.08961039
ILMN_2295559 125.4441 0.3155844
ILMN_1735045 506.2143 0
ILMN_1680754 126.4873 0.2909091

Total number of rows: 47231

Table truncated, full table size 1358 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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