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Sample GSM618105 Query DataSets for GSM618105
Status Public on May 22, 2013
Title Suspension, rep2
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics treatment: Suspension MP treated cells
cell type: HUVEC
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy Plus mini kit according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description H S 2
Data processing The data were normalised using quantile normalisation with GenomeStudio software.
 
Submission date Nov 04, 2010
Last update date May 22, 2013
Contact name Trinidad Montero
E-mail(s) t.monteromelendez@qmul.ac.uk
Organization name Whilliam Harvey Research Institute, Bart's and The London School of Medicine; Queen Mary University of London
Department Biochemical Pharmacology
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE25154 Genome-wide analysis of the affect of neutrophil-derived microparticles on HUVECs

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 123.8004 0.3805195
ILMN_2055271 122.5532 0.4103896
ILMN_1736007 117.3457 0.5142857
ILMN_2383229 123.1187 0.3948052
ILMN_1806310 136.6246 0.1246753
ILMN_1779670 89.18069 0.8597403
ILMN_1653355 142.8896 0.06363636
ILMN_1717783 71.29633 0.9974026
ILMN_1705025 134.0624 0.1649351
ILMN_1814316 121.8976 0.4207792
ILMN_2359168 91.65029 0.8285714
ILMN_1731507 70.81248 0.9987013
ILMN_1787689 96.64836 0.7766234
ILMN_3241953 412.82 0
ILMN_1745607 142.6892 0.06493507
ILMN_2136495 73.79355 0.9948052
ILMN_1668111 114.363 0.5649351
ILMN_2295559 114.0814 0.5688311
ILMN_1735045 447.6131 0
ILMN_1680754 143.1093 0.06363636

Total number of rows: 47231

Table truncated, full table size 1368 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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