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Sample GSM63850 Query DataSets for GSM63850
Status Public on Dec 10, 2017
Title Regenerating_MOON266
Sample type RNA
 
Source name Laser captured spinal cord neurons
Organism Rattus norvegicus
Characteristics Adult female Fischer 344
Biomaterial provider Lawrence Moon
Treatment protocol Cut 10um transverse cryosections of unfixed spinal cord, dehydrate, laser capture
Growth protocol n/a
Extracted molecule total RNA
Extraction protocol PicoPure (version C), Arcturus
Label Biotin
Label protocol Three round Eberwine amplification, proprietary modified Message Amp using BioArray High Yield labeling kit (Enzo) in last round.
 
Hybridization protocol Standard Affymetrix procedure for fragmentation and hybridization
Scan protocol Standard GCOS scanning, GeneChip Scanner 3000
Description Identification of genes associated with axotomy or regeneration in the CNS.
Data processing GCOS, scaled to 200
 
Submission date Jul 12, 2005
Last update date Dec 10, 2017
Contact name Lawrence DF Moon
E-mail(s) lawrence.moon@kcl.ac.uk
Organization name King's College London
Department Wolfson Centre for Age-Related Diseases
Lab Moon team
Street address 16 - 18 Newcomen Street
City London
ZIP/Postal code SE11UL
Country United Kingdom
 
Platform ID GPL1355
Series (1)
GSE2925 Identification of genes expressed by spinal cord neurons after axotomy and during axon regeneration

Data table header descriptions
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 158.1 P 0.00034
AFFX-BioB-M_at 316.1 P 0.000052
AFFX-BioB-3_at 335.5 P 0.000195
AFFX-BioC-5_at 865.5 P 0.000044
AFFX-BioC-3_at 662.2 P 0.000044
AFFX-BioDn-5_at 1538.2 P 0.000044
AFFX-BioDn-3_at 3538 P 0.000044
AFFX-CreX-5_at 5855.8 P 0.000052
AFFX-CreX-3_at 5564.3 P 0.000044
AFFX-DapX-5_at 367.3 P 0.000127
AFFX-DapX-M_at 734.5 P 0.00006
AFFX-DapX-3_at 819.7 P 0.00007
AFFX-LysX-5_at 403.6 P 0.000052
AFFX-LysX-M_at 700.7 P 0.000044
AFFX-LysX-3_at 764.8 P 0.000052
AFFX-PheX-5_at 831.5 P 0.000044
AFFX-PheX-M_at 953.1 P 0.000044
AFFX-PheX-3_at 928.3 P 0.000052
AFFX-ThrX-5_at 752.3 P 0.000052
AFFX-ThrX-M_at 830.4 P 0.000052

Total number of rows: 31099

Table truncated, full table size 815 Kbytes.




Supplementary file Size Download File type/resource
GSM63850.CEL.gz 4.5 Mb (ftp)(http) CEL

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