|
| Status |
Public on Dec 29, 2010 |
| Title |
UW_DnaseDgf_H7-hESC |
| Sample type |
SRA |
| |
|
| Source name |
H7-hESC
|
| Organism |
Homo sapiens |
| Characteristics |
lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: H7-hESC
cell organism: human
cell description: undifferentiated embryonic stem cells
cell lineage: inner cell mass
cell sex: U
labversion: lmax-v1.0
|
| Biomaterial provider |
WiCell
|
| Growth protocol |
H7-hESC_Stam_protocol.pdf
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
|
| |
|
| Library strategy |
DNase-Hypersensitivity |
| Library source |
genomic |
| Library selection |
DNAse |
| Instrument model |
Illumina Genome Analyzer II |
| |
|
| Data processing |
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeUwDgf
|
| |
|
| Submission date |
Dec 28, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
ENCODE DCC |
| E-mail(s) |
encode-help@lists.stanford.edu
|
| Organization name |
ENCODE DCC
|
| Street address |
300 Pasteur Dr
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305-5120 |
| Country |
USA |
| |
|
| Platform ID |
GPL9115 |
| Series (2) |
| GSE26328 |
DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human] |
| GSE51341 |
Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence |
|
| Relations |
| SRA |
SRX037112 |
| BioSample |
SAMN00189404 |
| Named Annotation |
GSM646563_hg19_wgEncodeUwDgfH7esRaw.bigWig |
| Named Annotation |
GSM646563_hg19_wgEncodeUwDgfH7esSig.bigWig |
