|
Status |
Public on Mar 01, 2011 |
Title |
Myers_Jurkat_2_None_UW |
Sample type |
SRA |
|
|
Source name |
Jurkat
|
Organism |
Homo sapiens |
Characteristics |
cell: Jurkat cell organism: Human cell description: T lymphoblastoid cell line derived from an acute T cell leukemia cell karyotype: cancer cell lineage: "The Jurkat cell line was established from the peripheral blood of a 14 year old boy by Schneider et al., and was originally designated JM." - ATCC cell sex: M replicate: 2 treatment: None obtainedby: UW
|
Biomaterial provider |
ATCC
|
Growth protocol |
Cells were grown according to ENCODE cell culture protocols: http://genome.ucsc.edu/ENCODE/protocols/cells/human/HudsonAlpha:Jurkat_protocol.pdf UW_Stam:Jurkat_Stam_protocol.pdf
|
Extracted molecule |
genomic DNA |
Extraction protocol |
For extraction protocol details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibMethylRrbs
|
|
|
Library strategy |
Bisulfite-Seq |
Library source |
genomic |
Library selection |
Reduced Representation |
Instrument model |
Illumina Genome Analyzer IIx |
|
|
Description |
Reduced Representation
|
Data processing |
For data processing details see: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibMethylRrbs
|
|
|
Submission date |
Mar 01, 2011 |
Last update date |
May 15, 2019 |
Contact name |
ENCODE DCC |
E-mail(s) |
encode-help@lists.stanford.edu
|
Organization name |
ENCODE DCC
|
Street address |
300 Pasteur Dr
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5120 |
Country |
USA |
|
|
Platform ID |
GPL10999 |
Series (1) |
GSE27584 |
DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha |
|
Relations |
SRA |
SRX066306 |
BioSample |
SAMN00621787 |