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Sample GSM7039800 Query DataSets for GSM7039800
Status Public on Apr 12, 2023
Title Normal3
Sample type RNA
 
Source name Mammary gland, non-challenged
Organism Mus musculus
Characteristics tissue: mammary gland
treatment: control, non-challenged
Treatment protocol Mice were infected with E. coli, Strep. uberis or M. bovis bacteria by intramammary infusion. After 24 or 48 hours, mammary tissues were sampled for RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the GeneElute Mammalian Total RNA Miniprep Kit (Sigma-Aldrich, Rehovot, Israel) combined with on-Column DNase I Digestion Set (Sigma) and stored at -80C.
Label None
Label protocol Labeling was performed according to manufacturer's instructions.
 
Hybridization protocol Hybridization was performed according to manufacturer's instructions.
Scan protocol nCounter Sprint profiler was used for scanning and image acquisition.
Data processing Data was analyzed using nSolver™ analysis software version 4.0
 
Submission date Feb 12, 2023
Last update date Apr 12, 2023
Contact name Nahum Yehuda Shpigel
E-mail(s) nahum.shpigel@mail.huji.ac.il
Phone 0548820526
Organization name Hebrew University
Department Veterinary
Lab Shpigelab
Street address POB 12
City Rehovot
State/province Please Select…
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL25266
Series (1)
GSE225127 Immune profiling of experimental murine mastitis

Data table header descriptions
ID_REF
VALUE nSolver™ computed normalized counts

Data table
ID_REF VALUE
2810417H13Rik 13.32297549
2900026A02Rik 1040.024774
Abcc8 9.159545652
Acad10 151.5488462
Acly 5025.259819
Acod1 8.326859683
Acot11 11.65760356
Acot3 15.8210334
Acox1 2318.197736
Adam19 24.14789308
Adam8 77.43979505
Adamts1 382.2028595
Adamts12 123.2375233
Adamts14 10.82491759
Adamts17 14.98834743
Adamts2 209.004178
Adamts3 24.14789308
Adamts4 20.81714921
Adamts9 148.2181024
Adcyap1r1 24.98057905

Total number of rows: 734

Table truncated, full table size 12 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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