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Sample GSM7039804 Query DataSets for GSM7039804
Status Public on Apr 12, 2023
Title Mycoplasma bovis PG45-1
Sample type RNA
 
Source name Mammary gland, Mycoplama bovis challenged
Organism Mus musculus
Characteristics tissue: mammary gland
treatment: Mycoplama bovis challenged
Treatment protocol Mice were infected with E. coli, Strep. uberis or M. bovis bacteria by intramammary infusion. After 24 or 48 hours, mammary tissues were sampled for RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the GeneElute Mammalian Total RNA Miniprep Kit (Sigma-Aldrich, Rehovot, Israel) combined with on-Column DNase I Digestion Set (Sigma) and stored at -80C.
Label None
Label protocol Labeling was performed according to manufacturer's instructions.
 
Hybridization protocol Hybridization was performed according to manufacturer's instructions.
Scan protocol nCounter Sprint profiler was used for scanning and image acquisition.
Data processing Data was analyzed using nSolver™ analysis software version 4.0
 
Submission date Feb 12, 2023
Last update date Apr 12, 2023
Contact name Nahum Yehuda Shpigel
E-mail(s) nahum.shpigel@mail.huji.ac.il
Phone 0548820526
Organization name Hebrew University
Department Veterinary
Lab Shpigelab
Street address POB 12
City Rehovot
State/province Please Select…
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL25266
Series (1)
GSE225127 Immune profiling of experimental murine mastitis

Data table header descriptions
ID_REF
VALUE nSolver™ computed normalized counts

Data table
ID_REF VALUE
2810417H13Rik 39.50669956
2900026A02Rik 456.2083164
Abcc8 16.93144267
Acad10 144.8578984
Acly 5247.806592
Acod1 537.1029869
Acot11 17.87207837
Acot3 11.28762845
Acox1 2024.248035
Adam19 59.26004934
Adam8 561.5595152
Adamts1 442.0987808
Adamts12 82.77594194
Adamts14 14.10953556
Adamts17 24.4565283
Adamts2 122.2826415
Adamts3 30.10034252
Adamts4 79.95403483
Adamts9 184.364598
Adcyap1r1 28.21907112

Total number of rows: 734

Table truncated, full table size 12 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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