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Sample GSM7039805 Query DataSets for GSM7039805
Status Public on Apr 12, 2023
Title Mycoplasma bovis PG45-2
Sample type RNA
 
Source name Mammary gland, Mycoplama bovis challenged
Organism Mus musculus
Characteristics tissue: mammary gland
treatment: Mycoplama bovis challenged
Treatment protocol Mice were infected with E. coli, Strep. uberis or M. bovis bacteria by intramammary infusion. After 24 or 48 hours, mammary tissues were sampled for RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the GeneElute Mammalian Total RNA Miniprep Kit (Sigma-Aldrich, Rehovot, Israel) combined with on-Column DNase I Digestion Set (Sigma) and stored at -80C.
Label None
Label protocol Labeling was performed according to manufacturer's instructions.
 
Hybridization protocol Hybridization was performed according to manufacturer's instructions.
Scan protocol nCounter Sprint profiler was used for scanning and image acquisition.
Data processing Data was analyzed using nSolver™ analysis software version 4.0
 
Submission date Feb 12, 2023
Last update date Apr 12, 2023
Contact name Nahum Yehuda Shpigel
E-mail(s) nahum.shpigel@mail.huji.ac.il
Phone 0548820526
Organization name Hebrew University
Department Veterinary
Lab Shpigelab
Street address POB 12
City Rehovot
State/province Please Select…
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL25266
Series (1)
GSE225127 Immune profiling of experimental murine mastitis

Data table header descriptions
ID_REF
VALUE nSolver™ computed normalized counts

Data table
ID_REF VALUE
2810417H13Rik 69.12862228
2900026A02Rik 506.0897903
Abcc8 4.267198906
Acad10 189.4636314
Acly 4800.59877
Acod1 444.6421261
Acot11 17.92223541
Acot3 12.80159672
Acox1 1934.747984
Adam19 68.2751825
Adam8 530.839544
Adamts1 414.7717337
Adamts12 86.19741791
Adamts14 14.50847628
Adamts17 23.89631388
Adamts2 143.3778833
Adamts3 14.50847628
Adamts4 43.52542885
Adamts9 279.9282483
Adcyap1r1 18.77567519

Total number of rows: 734

Table truncated, full table size 12 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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