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GEO accession:
Sample GSM73364
Query DataSets for GSM73364
Status
Public on Dec 01, 2005
Title
AML_INV(16)_LIB1
Sample type
SAGE
Anchor
NlaIII
Tag Count
100003
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeloid Leukemia (AML) patient sample with chromosomal inversion INV(16)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CCCATCGTCC
979
9789.71
GTGAAACCCC
845
8449.75
CCACTGCACT
788
7879.76
AAGACAGTGG
702
7019.79
CCTGTAATCC
674
6739.80
ATTTGAGAAG
643
6429.81
CACCTAATTG
547
5469.84
TTCATACACC
540
5399.84
GGATTTGGCC
513
5129.85
TACCTGCAGA
487
4869.85
GTGAAACCCT
458
4579.86
ACTTTTTCAA
427
4269.87
ATGTAAAAAA
425
4249.87
GCTCCCCTTT
405
4049.88
CAATAAATGT
404
4039.88
GTTGTGGTTA
401
4009.88
TACCATCAAT
378
3779.89
GAGGGAGTTT
377
3769.89
TTGGTCCTCT
369
3689.89
TAGGTTGTCT
359
3589.89
Total number of rows:
34325
Table truncated, full table size
639 Kbytes
.
Supplementary data files not provided
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